Bwa-mem2 Alternatives
Similar projects and alternatives to bwa-mem2
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minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
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SonarQube
Static code analysis for 29 languages.. Your projects are multi-language. So is SonarQube analysis. Find Bugs, Vulnerabilities, Security Hotspots, and Code Smells so you can release quality code every time. Get started analyzing your projects today for free.
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NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better bwa-mem2 alternative or higher similarity.
bwa-mem2 reviews and mentions
Posts with mentions or reviews of bwa-mem2.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-11-21.
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sqzlib - kseq compatible DNA fastA/Q encoding and compression library
Most importantly, sqzlib is fully compatible with klib/kseq.h one of the highest performance fastA/Q parsers. This means that any application that uses kseq.h for fastA/Q parsing, can be easily modified to use sqzlib instead. You can find patched versions of seqstats, minimap2, and bwa-mem2 in my github, or you can patch them yourself with the included patches.
Stats
Basic bwa-mem2 repo stats
1
0
2.4
8 months ago
7PintsOfCherryGarcia/bwa-mem2 is an open source project licensed under GNU General Public License v3.0 or later which is an OSI approved license.
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