Bwa-mem2 Alternatives
Similar projects and alternatives to bwa-mem2
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InfluxDB
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edlib
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
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minimap2
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Stream
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bwa-mem2 discussion
bwa-mem2 reviews and mentions
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Anyone use DRAGEN-GATK?
If you haven’t heard of it already you may want to check out https://github.com/bwa-mem2/bwa-mem2 which is a faster version of bwa-mem. I’ve been using it for a while now and found it to be quite stable, same results as the original and the speed improvement is nice.
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Software Development Project
I’ve recently switched to bwa mem2 and the speed increase is nice for what is basically a drop in replacement (after a bit of validation to make sure that was true). https://github.com/bwa-mem2/bwa-mem2
Stats
bwa-mem2/bwa-mem2 is an open source project licensed under GNU General Public License v3.0 or later which is an OSI approved license.
The primary programming language of bwa-mem2 is C++.
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