A fast and sensitive gapped read aligner (by BenLangmead)

Bowtie2 Alternatives

Similar projects and alternatives to bowtie2 based on common topics and language

  • STAR

    bowtie2 VS STAR

    RNA-seq aligner

  • bwa-mem2

    bowtie2 VS bwa-mem2

    The next version of bwa-mem

  • Zigi

    Delete the most useless function ever: context switching.. Zigi monitors Jira and GitHub updates, pings you when PRs need approval and lets you take fast actions - all directly from Slack! Plus it reduces cycle time by up to 75%.

  • seq

    bowtie2 VS seq

    A high-performance, Pythonic language for bioinformatics

  • megahit

    bowtie2 VS megahit

    Ultra-fast and memory-efficient (meta-)genome assembler

  • bowtie

    bowtie2 VS bowtie

    An ultrafast memory-efficient short read aligner

  • Scout APM

    Truly a developer’s best friend. Scout APM is great for developers who want to find and fix performance issues in their applications. With Scout, we'll take care of the bugs so you can focus on building great things 🚀.

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a better bowtie2 alternative or higher similarity.

bowtie2 reviews and mentions

Posts with mentions or reviews of bowtie2. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2021-04-25.


Basic bowtie2 repo stats
8 days ago

BenLangmead/bowtie2 is an open source project licensed under GNU General Public License v3.0 only which is an OSI approved license.

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