pyCirclize
pyCircos
| pyCirclize | pyCircos | |
|---|---|---|
| 6 | 5 | |
| 619 | 308 | |
| - | - | |
| 8.6 | 3.0 | |
| about 1 month ago | about 1 month ago | |
| Python | Python | |
| MIT License | GNU General Public License v3.0 only |
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pyCirclize
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Circular enrichment map - does anyone know how to make these?
https://github.com/moshi4/pyCirclize could help.
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This Week In Python
pyCirclize – Circular visualization in Python
- Show HN: PyCirclize – Circular Visualization in Python
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Circular visualization in Python (Circos Plot, Chord Diagram)
pyCirclize (GitHub / Document) enables easy and flexible execution of circular data visualizations such as Chord Diagram and Circos from the Python API. As an example, user can perform the following circular data visualization.
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pyCirclize: Circular visualization in Python (Chord Diagram, Circos Plot)
GitHub | Documentation
pyCircos
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Python packages to prepare publication-quality figures.
pyCircos: https://github.com/ponnhide/pyCircos
- Show HN: Beautiful Circos Plots in Matplotlib
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pyCircos: Beautiful circos plots in matplotlib
Thank you for everyone's comments. I'm glad for getting positive responses from this community. This library provides the way not only for drawing circos plots and for visualizing circular phylogenetic trees. https://github.com/ponnhide/pyCircos/blob/master/img/tree-example.png This function is still in progress; however, I hope it helps your biological science.
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Beautiful circos plots in Python
Here, I made pyCircos that allow drawing circos plots with matplotlib. By using this package, not only circos plots but also complex polar plots can be quickly drawn.
What are some alternatives?
pyGenomeViz - A genome visualization python package for comparative genomics
itermplot - An awesome iTerm2 backend for Matplotlib, so you can plot directly in your terminal.
circlize - Circular visualization in R
patchworklib - Patchwork for matplotlib: A subplot manager for intuitive layouts in matplotlib, seaborn, and plotnine.
pynimate - Python package for statistical data animations
graphlan - High-quality circular representations of taxonomic and phylogenetic trees
clinker - Gene cluster comparison figure generator
phylophlan - Precise phylogenetic analysis of microbial isolates and genomes from metagenomes
mise - dev tools, env vars, task runner
ielex-data-and-tree - Data and scripts for producing a Baysian phylogenetic tree sample of for the Indo-European family which is "good enough", using data from IELex (Dunn et al. 2011).
tinycov - Command line tool to plot genomic coverage from a BAM file
FastANI - Fast Whole-Genome Similarity (ANI) Estimation