pyCirclize
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart) (by moshi4)
clinker
Gene cluster comparison figure generator (by gamcil)
| pyCirclize | clinker | |
|---|---|---|
| 7 | 2 | |
| 833 | 557 | |
| 3.0% | 1.1% | |
| 8.4 | 5.4 | |
| about 2 months ago | 4 months ago | |
| Python | Python | |
| MIT License | MIT License |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
pyCirclize
Posts with mentions or reviews of pyCirclize.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-04-02.
- Circular Data Visualization in Python
-
Circular enrichment map - does anyone know how to make these?
https://github.com/moshi4/pyCirclize could help.
-
This Week In Python
pyCirclize – Circular visualization in Python
- Show HN: PyCirclize – Circular Visualization in Python
-
Circular visualization in Python (Circos Plot, Chord Diagram)
pyCirclize (GitHub / Document) enables easy and flexible execution of circular data visualizations such as Chord Diagram and Circos from the Python API. As an example, user can perform the following circular data visualization.
-
pyCirclize: Circular visualization in Python (Chord Diagram, Circos Plot)
GitHub | Documentation
clinker
Posts with mentions or reviews of clinker.
We have used some of these posts to build our list of alternatives
and similar projects.
-
Need help with protein gene-neighborhood methods.
Being a silent reader all this while, this is my first question here and a very basic indeed. I want to generate some gene neighborhood clusters for a set of protein fasta files I have from UniProtKB. I plan to use: 1. http://www.webflags.se/ and 2. https://github.com/gamcil/clinker
- Stuck Running Bioinformatics Tool Through Command
What are some alternatives?
When comparing pyCirclize and clinker you can also consider the following projects:
pyCircos - python Circos
pyGenomeViz - A genome visualization python package for comparative genomics
MultiQC - Aggregate results from bioinformatics analyses across many samples into a single report.
pynimate - Python package for statistical data animations
quast - Genome assembly evaluation tool