pyCircos
itermplot
| pyCircos | itermplot | |
|---|---|---|
| 5 | 2 | |
| 309 | 1,481 | |
| - | - | |
| 3.0 | 0.0 | |
| about 1 month ago | 11 months ago | |
| Python | Python | |
| GNU General Public License v3.0 only | - |
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pyCircos
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Python packages to prepare publication-quality figures.
pyCircos: https://github.com/ponnhide/pyCircos
- Show HN: Beautiful Circos Plots in Matplotlib
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pyCircos: Beautiful circos plots in matplotlib
Thank you for everyone's comments. I'm glad for getting positive responses from this community. This library provides the way not only for drawing circos plots and for visualizing circular phylogenetic trees. https://github.com/ponnhide/pyCircos/blob/master/img/tree-example.png This function is still in progress; however, I hope it helps your biological science.
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Beautiful circos plots in Python
Here, I made pyCircos that allow drawing circos plots with matplotlib. By using this package, not only circos plots but also complex polar plots can be quickly drawn.
itermplot
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UnicodePlots
If you happen to use `iTerm2`, then https://github.com/daleroberts/itermplot works very well. I've used it before and can recommend it pretty highly.
- iTerm2 back end for Matplotlib – plot directly in your terminal
What are some alternatives?
pyCirclize - Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
termplotlib - :chart_with_upwards_trend: Plotting on the command line
patchworklib - Patchwork for matplotlib: A subplot manager for intuitive layouts in matplotlib, seaborn, and plotnine.
pyGenomeViz - A genome visualization python package for comparative genomics
graphlan - High-quality circular representations of taxonomic and phylogenetic trees
LDV-plotter - This is a mathematics functions plotter. With this tool you can create beautiful plots and surprise your friends.
phylophlan - Precise phylogenetic analysis of microbial isolates and genomes from metagenomes
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ielex-data-and-tree - Data and scripts for producing a Baysian phylogenetic tree sample of for the Indo-European family which is "good enough", using data from IELex (Dunn et al. 2011).
yellowbrick - Visual analysis and diagnostic tools to facilitate machine learning model selection.
seaborn-image - High-level API for attractive and descriptive image visualization in Python
bitrate-variation-plotter - Plots a graph showing the bitrate every second or the bitrate of every GOP, for an audio or video file.