rBLAST
Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package (by mhahsler)
bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data (by GoekeLab)
| rBLAST | bambu | |
|---|---|---|
| 1 | 1 | |
| 100 | 163 | |
| - | 1.2% | |
| 7.2 | 5.7 | |
| 5 days ago | 27 days ago | |
| R | R | |
| GNU General Public License v3.0 only | GNU General Public License v3.0 only |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
rBLAST
Posts with mentions or reviews of rBLAST.
We have used some of these posts to build our list of alternatives
and similar projects.
bambu
Posts with mentions or reviews of bambu.
We have used some of these posts to build our list of alternatives
and similar projects.
What are some alternatives?
When comparing rBLAST and bambu you can also consider the following projects:
TCGAbiolinks - TCGAbiolinks
rna-seq-kallisto-sleuth - A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
dada2 - Accurate sample inference from amplicon data with single nucleotide resolution
drugfindR - Repository holding the code for the drugfindR R package
rhmmer - Simple R utilities for working with HMMER
rnaseq - RNA-seq analyses.
clustifyr - Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets
cosmosR - COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.