bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data (by GoekeLab)
cosmosR
COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets. (by saezlab)
Our great sponsors
| bambu | cosmosR | |
|---|---|---|
| 1 | 1 | |
| 163 | 52 | |
| 3.7% | - | |
| 5.6 | 6.3 | |
| 21 days ago | 4 months ago | |
| R | R | |
| GNU General Public License v3.0 only | GNU General Public License v3.0 only |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
bambu
Posts with mentions or reviews of bambu.
We have used some of these posts to build our list of alternatives
and similar projects.
cosmosR
Posts with mentions or reviews of cosmosR.
We have used some of these posts to build our list of alternatives
and similar projects.
-
Multi-omics integration and analysis tutorials
COSMOS: https://github.com/saezlab/cosmosR
What are some alternatives?
When comparing bambu and cosmosR you can also consider the following projects:
rna-seq-kallisto-sleuth - A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
drugfindR - Repository holding the code for the drugfindR R package
TCGAbiolinks - TCGAbiolinks
rnaseq - RNA-seq analyses.
rBLAST - Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
clustifyr - Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets