bambu VS TCGAbiolinks

Compare bambu vs TCGAbiolinks and see what are their differences.

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bambu TCGAbiolinks
1 2
163 275
1.2% 1.1%
5.7 4.6
5 days ago 28 days ago
R R
GNU General Public License v3.0 only -
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

bambu

Posts with mentions or reviews of bambu. We have used some of these posts to build our list of alternatives and similar projects.

TCGAbiolinks

Posts with mentions or reviews of TCGAbiolinks. We have used some of these posts to build our list of alternatives and similar projects.

What are some alternatives?

When comparing bambu and TCGAbiolinks you can also consider the following projects:

rna-seq-kallisto-sleuth - A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.

dada2 - Accurate sample inference from amplicon data with single nucleotide resolution

drugfindR - Repository holding the code for the drugfindR R package

maftools - Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

rnaseq - RNA-seq analyses.

rBLAST - Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package

awesome-R - A curated list of awesome R packages, frameworks and software.

clustifyr - Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets

ggplot2 - An implementation of the Grammar of Graphics in R

cosmosR - COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.