Top 11 R Bioinformatic Projects

dada2

1 446 4.3 R

Accurate sample inference from amplicon data with single nucleotide resolution
maftools

3 414 6.6 R

Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
WorkOS

workos.com sponsored

The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.
rBLAST

1 99 4.8 R

Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
Peptides

1 74 2.8 R

An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
covid19-event-risk-planner

20 47 0.0 R

COVID19 risk planner R-Shiny application
biomisc_R

3 23 0.0 R

command line bioinformatic scripts written in R
rhmmer

1 14 0.0 R

Simple R utilities for working with HMMER
InfluxDB

www.influxdata.com sponsored

Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
chromatographR

1 12 8.9 R

Toolset for the reproducible analysis of chromatography data in R (HPLC-DAD/UV, GC-FID).
Baltica

1 7 2.6 R

Baltica: integrated differential junction usage
drugfindR

1 7 9.5 R

Repository holding the code for the drugfindR R package
ermineR

1 6 0.0 R

R wrapper for ermineJ

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).