edgecase VS pyCirclize

Compare edgecase vs pyCirclize and see what are their differences.

edgecase

A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, and for haplotype inference. (by LankyCyril)
telomeres haplotypes repeats Genomics Bioinformatics bioinformatics-pipeline genomics-visualization long-reads long-read-sequencing
Source Code
biorxiv.org
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pyCirclize

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart) (by moshi4)
Bioinformatics circos Matplotlib Python chord-diagram comparative-genomics Genomics genomics-visualization microbial-genomics Visualization phylogenetic-trees Data Visualization Dataviz
Source Code
moshi4.github.io
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edgecase pyCirclize
1 6
14 625
- -
2.1 8.6
4 months ago about 1 month ago
Python Python
GNU General Public License v3.0 only MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
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edgecase

Posts with mentions or reviews of edgecase. We have used some of these posts to build our list of alternatives and similar projects.

pyCirclize

Posts with mentions or reviews of pyCirclize. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-04-02.

What are some alternatives?

When comparing edgecase and pyCirclize you can also consider the following projects:

ariba - Antimicrobial Resistance Identification By Assembly

pyGenomeViz - A genome visualization python package for comparative genomics

pipeline-structural-variation - Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data

pyCircos - python Circos

pysradb - Package for fetching metadata and downloading data from SRA/ENA/GEO

circlize - Circular visualization in R

pynimate - Python package for statistical data animations

clinker - Gene cluster comparison figure generator

mise - dev tools, env vars, task runner

tinycov - Command line tool to plot genomic coverage from a BAM file

FastANI - Fast Whole-Genome Similarity (ANI) Estimation

prettymaps - A small set of Python functions to draw pretty maps from OpenStreetMap data. Based on osmnx, matplotlib and shapely libraries.

edgecase vs ariba pyCirclize vs pyGenomeViz edgecase vs pipeline-structural-variation pyCirclize vs pyCircos edgecase vs pysradb pyCirclize vs circlize pyCirclize vs pynimate pyCirclize vs clinker pyCirclize vs mise pyCirclize vs tinycov pyCirclize vs FastANI pyCirclize vs prettymaps