dada2 VS TCGAbiolinks

Compare dada2 vs TCGAbiolinks and see what are their differences.

CodeRabbit: AI Code Reviews for Developers
Revolutionize your code reviews with AI. CodeRabbit offers PR summaries, code walkthroughs, 1-click suggestions, and AST-based analysis. Boost productivity and code quality across all major languages with each PR.
coderabbit.ai
featured
Nutrient - The #1 PDF SDK Library
Bad PDFs = bad UX. Slow load times, broken annotations, clunky UX frustrates users. Nutrient’s PDF SDKs gives seamless document experiences, fast rendering, annotations, real-time collaboration, 100+ features. Used by 10K+ devs, serving ~half a billion users worldwide. Explore the SDK for free.
nutrient.io
featured
dada2 TCGAbiolinks
1 2
485 305
1.0% 1.6%
6.7 5.1
12 days ago 14 days ago
R R
GNU Lesser General Public License v3.0 only -
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

dada2

Posts with mentions or reviews of dada2. We have used some of these posts to build our list of alternatives and similar projects.

TCGAbiolinks

Posts with mentions or reviews of TCGAbiolinks. We have used some of these posts to build our list of alternatives and similar projects.

What are some alternatives?

When comparing dada2 and TCGAbiolinks you can also consider the following projects:

GTDBTk - GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

bambu - Reference-guided transcript discovery and quantification for long read RNA-Seq data

MicrobiomeStat - Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat

maftools - Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

kraken-biom - Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).

rBLAST - Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package

awesome-R - A curated list of awesome R packages, frameworks and software.

MMseqs2 - MMseqs2: ultra fast and sensitive search and clustering suite

ggplot2 - An implementation of the Grammar of Graphics in R

seqinr - Biological sequences retrieval and analysis

r4ds - R for data science: a book

CodeRabbit: AI Code Reviews for Developers
Revolutionize your code reviews with AI. CodeRabbit offers PR summaries, code walkthroughs, 1-click suggestions, and AST-based analysis. Boost productivity and code quality across all major languages with each PR.
coderabbit.ai
featured
Nutrient - The #1 PDF SDK Library
Bad PDFs = bad UX. Slow load times, broken annotations, clunky UX frustrates users. Nutrient’s PDF SDKs gives seamless document experiences, fast rendering, annotations, real-time collaboration, 100+ features. Used by 10K+ devs, serving ~half a billion users worldwide. Explore the SDK for free.
nutrient.io
featured

Did you know that R is
the 53rd most popular programming language
based on number of references?