R microbiome

Open-source R projects categorized as microbiome
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Topics: Visualization metagenomics taxonomy metagenomes Statistics
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R microbiome Projects

  • dada2

    Accurate sample inference from amplicon data with single nucleotide resolution

  • MicrobiomeStat

    Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat

    • Project mention: Check out this awesome package for comprehensive and longitudinal microbiome analysis in R! | /r/bioinformatics | 2023-09-28

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    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).

Index

Project Stars
1 dada2 452
2 MicrobiomeStat 24

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