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Top 19 R Visualization Projects
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Project mention: What is your favorite piece if Technogy or R package which you wish you would have discovered earlier ? | reddit.com/r/rstats | 2022-10-21
patchwork and ggrepel
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Project mention: esquisse: RStudio add-in to make plots interactively with ggplot2 {R} | reddit.com/r/Sciatro | 2022-06-05
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Project mention: DiagrammeR: Graph and network visualization using tabular data in R. | reddit.com/r/coolgithubprojects | 2022-08-02
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Project mention: Resources to learn how to create custom package for ggplot2 extension (color palettes, themes, axis, etc)? | reddit.com/r/RStudio | 2022-09-23
Look at the code of existing projects, eg. ggthemes: https://github.com/jrnold/ggthemes
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The Bioconductor package enrichplot has some nice functions for visualizing the results of clusterProfiler. See: https://yulab-smu.top/biomedical-knowledge-mining-book/
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Project mention: Advice about R for bioinformatics (ggtree and metadata) | reddit.com/r/bioinformatics | 2022-12-14
I don’t have a lot of experience with this particular package, but if a package provides vignettes I like to look through those. ggtree seems to provide an entire book, which may be helpful to you. You could also look at the examples in the docs, or other scripts people have written. If you find some, read through them line by line and try to understand what they’re doing. Run each line and look at what the output is. See if you can reproduce the example analyses on your own, maybe with different data. That’ll help you learn the packages with more training wheels than just striking out on your own, and then once you get more comfortable you should be able to branch out more.
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SonarLint
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UpSetR
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
Want this type of plot: https://github.com/hms-dbmi/UpSetR
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may I suggest hexSticker
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Project mention: representing gene/transcript layout with variants, suitable approaches? | reddit.com/r/bioinformatics | 2023-03-03
https://github.com/dzhang32/ggtranscript and https://github.com/kauralasoo/wiggleplotr look like good starting points, and since they output ggplot objects you can add some layers (like geom_segment or other geometries, and ggrepel for labels) to annotate them. Otherwise you can go the "from scratch" route using ggplot with some polygons and segments.
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echarty
The goal of echarty is to provide a minimal interface, a “glue”, between R and ECharts, then let your R data lists build the chart. There are utilities included to assist with data preparation, Shiny with proxy and JS plugins. Have the full functionality of ECharts in R with minimal overhead!
Project mention: echarts4r VS echarty - a user suggested alternative | libhunt.com/r/echarts4r | 2022-06-02A thin R wrapper around Javascript library ECharts. Users can benefit from ECharts full functionality to build interactive charts in R and Shiny with minimal overhead.
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Project mention: Germany is currently overperforming as hell, every match I got into, it's always a shit ton of nation vs Germany (maybe with some other underrated nations) and they still curb stomp our entire team with their light tank spamming | reddit.com/r/Warthunder | 2022-04-12
Around 9.0? Yes. Its always been strong there and now many (expierenced) players flood the match maker because of the Puma. Other than that. Not really. https://wt.controlnet.space
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Notice that the package has been renamed. Please check out the corresponding release notes to see what changes you need to make in your R project to use the updated package.
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SaaSHub
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R Visualization related posts
- Visualizing gene ontology output
- Advice about R for bioinformatics (ggtree and metadata)
- What is your favorite piece if Technogy or R package which you wish you would have discovered earlier ?
- esquisse: RStudio add-in to make plots interactively with ggplot2 {R}
- Upset plots in Plotly/Dash?
- What is this chart type called? I’d like to recreate something similar in ggplot but I’m not sure what to Google for the code. Thanks guys
- Dynamic subplot layout on Jupyter-lab
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A note from our sponsor - InfluxDB
www.influxdata.com | 21 Mar 2023
Index
What are some of the best open-source Visualization projects in R? This list will help you:
Project | Stars | |
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1 | patchwork | 2,188 |
2 | esquisse | 1,620 |
3 | DiagrammeR | 1,620 |
4 | ggthemes | 1,223 |
5 | ggthemr | 833 |
6 | clusterProfiler | 752 |
7 | ggtree | 700 |
8 | UpSetR | 656 |
9 | hexSticker | 641 |
10 | ggsci | 551 |
11 | complex-upset | 344 |
12 | geofacet | 317 |
13 | ggshakeR | 99 |
14 | geomnet | 91 |
15 | ggtranscript | 84 |
16 | echarty | 48 |
17 | wt-data-project.visualization | 24 |
18 | uefa-ec | 23 |
19 | bpmn-visualization-R | 8 |