Patterns Alternatives

Similar projects and alternatives to patterns

• sarek

  5 338 9.9 Nextflow patterns VS sarek

  Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

  

• rnaseq

  14 780 9.4 Nextflow patterns VS rnaseq

  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  

• InfluxDB

  www.influxdata.com featured

  Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

  

• eager

  1 124 7.6 Nextflow patterns VS eager

  A fully reproducible and state-of-the-art ancient DNA analysis pipeline

  

• rnaseq-nf

  1 62 5.5 Nextflow patterns VS rnaseq-nf

  A proof of concept of RNAseq pipeline

  

• configs

  1 77 9.7 Nextflow patterns VS configs

  Config files used to define parameters specific to compute environments at different Institutions (by nf-core)

  

• mag

  2 182 9.4 Nextflow patterns VS mag

  Assembly and binning of metagenomes

  

• rnatoy

  1 28 0.0 Nextflow patterns VS rnatoy

  Discontinued A proof of concept RNA-Seq pipeline with Nextflow

  

• SaaSHub

  www.saashub.com featured

  SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives

  

• atacseq

  2 160 7.0 Nextflow patterns VS atacseq

  ATAC-seq peak-calling and QC analysis pipeline

  

• chipseq

  1 172 0.0 Nextflow patterns VS chipseq

  ChIP-seq peak-calling, QC and differential analysis pipeline.