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Why does it feels impossible to set up github nextflow pipeline without a root?
1 project | /r/bioinformatics | 7 Jul 2021

To pick a random example config file (https://github.com/nf-core/configs/blob/master/conf/cambridge.config) - they have specified that singularity should be used, that the cluster's job scheduler is slurm and the maximum memory/time/cpus.