Sarek Alternatives

Similar projects and alternatives to sarek based on common topics and language

  • GitHub repo mag

    sarek VS mag

    Assembly and binning of metagenomes (by nf-core)

  • GitHub repo eager

    sarek VS eager

    A fully reproducible and state-of-the-art ancient DNA analysis pipeline

  • Scout APM

    Scout APM: A developer's best friend. Try free for 14-days. Scout APM uses tracing logic that ties bottlenecks to source code so you know the exact line of code causing performance issues and can get back to building a great product faster.

  • GitHub repo rnaseq

    sarek VS rnaseq

    RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  • GitHub repo galaxy

    sarek VS galaxy

    Data intensive science for everyone. (by galaxyproject)

  • GitHub repo configs

    sarek VS configs

    Config files used to define parameters specific to compute environments at different Institutions (by nf-core)

  • GitHub repo rnaseq-nf

    sarek VS rnaseq-nf

    A proof of concept of RNAseq pipeline

  • GitHub repo rnatoy

    sarek VS rnatoy

    A proof of concept RNA-Seq pipeline with Nextflow

  • Nanos

    Run Linux Software Faster and Safer than Linux with Unikernels.

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a better sarek alternative or higher similarity.

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Reviews and mentions

Posts with mentions or reviews of sarek. We have used some of these posts to build our list of alternatives and similar projects.

Stats

Basic sarek repo stats
2
126
7.7
1 day ago

nf-core/sarek is an open source project licensed under MIT License which is an OSI approved license.

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