Sarek Alternatives

Similar projects and alternatives to sarek based on common topics and language

• mag

  0 69 9.4 Nextflow sarek VS mag

  Assembly and binning of metagenomes (by nf-core)

  

• eager

  0 61 9.2 Nextflow sarek VS eager

  A fully reproducible and state-of-the-art ancient DNA analysis pipeline

  

• Scout APM

  scoutapm.com

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  Scout APM: A developer's best friend. Try free for 14-days. Scout APM uses tracing logic that ties bottlenecks to source code so you know the exact line of code causing performance issues and can get back to building a great product faster.

  

• rnaseq

  0 396 9.7 Nextflow sarek VS rnaseq

  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  

• galaxy

  0 884 10.0 Python sarek VS galaxy

  Data intensive science for everyone. (by galaxyproject)

  

• configs

  0 37 9.5 Nextflow sarek VS configs

  Config files used to define parameters specific to compute environments at different Institutions (by nf-core)

  

• rnaseq-nf

  0 39 5.2 Nextflow sarek VS rnaseq-nf

  A proof of concept of RNAseq pipeline

  

• rnatoy

  0 28 0.0 Nextflow sarek VS rnatoy

  A proof of concept RNA-Seq pipeline with Nextflow

  

• Nanos

  github.com/nanovms

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  Run Linux Software Faster and Safer than Linux with Unikernels.

  

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