Sarek Alternatives

Similar projects and alternatives to sarek

• rnaseq-nf

  - 52 3.8 Nextflow sarek VS rnaseq-nf

  A proof of concept of RNAseq pipeline

  

• galaxy

  - 1,050 10.0 Python sarek VS galaxy

  Data intensive science for everyone.

  

• InfluxDB

  www.influxdata.com

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  Build time-series-based applications quickly and at scale.. InfluxDB is the Time Series Platform where developers build real-time applications for analytics, IoT and cloud-native services. Easy to start, it is available in the cloud or on-premises.

  

• mag

  - 112 9.1 Nextflow sarek VS mag

  Assembly and binning of metagenomes

  

• rnatoy

  - 28 0.0 Nextflow sarek VS rnatoy

  A proof of concept RNA-Seq pipeline with Nextflow

  

• configs

  - 62 8.7 Nextflow sarek VS configs

  Config files used to define parameters specific to compute environments at different Institutions (by nf-core)

  

• GATK

  1 9 10.0 Nextflow sarek VS GATK

  Germline Variant Calling Nextflow Pipeline Based On GATK4 Best Practices

  

• CancerDB

  - 21 10.0 JavaScript sarek VS CancerDB

  CancerDB: A public domain knowledge graph focused on cancer treatments distributed as a CSV file.

• SonarLint

  www.sonarlint.org

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  Clean code begins in your IDE with SonarLint. Up your coding game and discover issues early. SonarLint is a free plugin that helps you find & fix bugs and security issues from the moment you start writing code. Install from your favorite IDE marketplace today.