Trending Nextflow Projects

This page lists the top trending Nextflow projects based on the growth of GitHub stars.
It is updated once every day. The last update was on 30 Jan 2023.
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Top 6 Trending Nextflow Projects

  • sarek

    Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

  • mag

    Assembly and binning of metagenomes

  • atacseq

    ATAC-seq peak-calling, QC and differential analysis pipeline

  • chipseq

    ChIP-seq peak-calling, QC and differential analysis pipeline.

  • rnaseq

    RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  • patterns

    A curated collection of Nextflow implementation patterns (by nextflow-io)

ABOUT: The growth percentage is calculated as the increase in the number of stars compared to the previous month. We list only projects that have at least 500 stars and a GitHub organization logo set.


What are some of the trending open-source Nextflow projects? This list will help you:

Project Growth
1 sarek 4.5%
2 mag 2.7%
3 atacseq 2.3%
4 chipseq 2.2%
5 rnaseq 2.1%
6 patterns 0.8%