Ariba Alternatives

Similar projects and alternatives to ariba

• abricate

  3 334 0.0 Perl ariba VS abricate

  :mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes

• MGEfinder

  1 96 0.0 Python ariba VS MGEfinder

  A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.

  

• WorkOS

  workos.com sponsored

  The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.

  

• abritamr

  1 56 7.4 Python ariba VS abritamr

  A pipeline for running AMRfinderPlus and collating results into functional classes

  

• galaxy

  4 1,313 10.0 Python ariba VS galaxy

  Data intensive science for everyone.

  

• 16SMaRT

  3 7 0.0 Python ariba VS 16SMaRT

  16s rRNA Sequencing Meta-analysis Reproducibility Tool (using mothur).

• edgecase

  1 14 2.1 Python ariba VS edgecase

  A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, and for haplotype inference.

• hgvs

  1 231 8.3 Python ariba VS hgvs

  Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`

  

• InfluxDB

  www.influxdata.com sponsored

  Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

  

• deepvariant

  5 3,078 9.1 Python ariba VS deepvariant

  DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.