pyCirclize
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart) (by moshi4)
circlize
Circular visualization in R (by jokergoo)
| pyCirclize | circlize | |
|---|---|---|
| 6 | 4 | |
| 619 | 944 | |
| - | - | |
| 8.6 | 3.6 | |
| about 1 month ago | 6 months ago | |
| Python | R | |
| MIT License | GNU General Public License v3.0 or later |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
pyCirclize
Posts with mentions or reviews of pyCirclize.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-04-02.
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Circular enrichment map - does anyone know how to make these?
https://github.com/moshi4/pyCirclize could help.
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This Week In Python
pyCirclize – Circular visualization in Python
- Show HN: PyCirclize – Circular Visualization in Python
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Circular visualization in Python (Circos Plot, Chord Diagram)
pyCirclize (GitHub / Document) enables easy and flexible execution of circular data visualizations such as Chord Diagram and Circos from the Python API. As an example, user can perform the following circular data visualization.
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pyCirclize: Circular visualization in Python (Chord Diagram, Circos Plot)
GitHub | Documentation
circlize
Posts with mentions or reviews of circlize.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-06-05.
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How does one create this kind of figure?
Have you tried a chord diagram using circulize? Circular Visualization in R
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Circular enrichment map - does anyone know how to make these?
Take a look at R package circlize -> https://jokergoo.github.io/circlize_book/book/
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Show HN: PyCirclize – Circular Visualization in Python
From the citation, it looks like circlize was used.
https://github.com/jokergoo/circlize
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Circular visualization in Python (Circos Plot, Chord Diagram)
In R language, circlize is a well-known circular visualization package that is used by many users. Circlize provides many high-level and low-level APIs for circular visualization, and users can write code for circular visualization in a flexible way. On the other hand, there is still no circular visualization package in Python that is as feature-rich and widely used by users as circlize. Therefore, I developed pyCirclize for the purpose of making circlize-like visualization available in Python.
What are some alternatives?
When comparing pyCirclize and circlize you can also consider the following projects:
pyGenomeViz - A genome visualization python package for comparative genomics
UpSetR - An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
pyCircos - python Circos
pynimate - Python package for statistical data animations
clinker - Gene cluster comparison figure generator
mise - dev tools, env vars, task runner
tinycov - Command line tool to plot genomic coverage from a BAM file
FastANI - Fast Whole-Genome Similarity (ANI) Estimation
prettymaps - A small set of Python functions to draw pretty maps from OpenStreetMap data. Based on osmnx, matplotlib and shapely libraries.
trio - Trio – a friendly Python library for async concurrency and I/O