megahit VS GenomicSQLite

Compare megahit vs GenomicSQLite and see what are their differences.


Ultra-fast and memory-efficient (meta-)genome assembler (by voutcn)
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megahit GenomicSQLite
1 1
448 137
- -
0.0 4.7
about 1 month ago 27 days ago
C++ C++
GNU General Public License v3.0 only Apache License 2.0
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.


Posts with mentions or reviews of megahit. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning megahit yet.
Tracking mentions began in Dec 2020.


Posts with mentions or reviews of GenomicSQLite. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-07-31.

What are some alternatives?

When comparing megahit and GenomicSQLite you can also consider the following projects: - Haplotype VCF comparison tools

FlatBuffers - FlatBuffers: Memory Efficient Serialization Library

seq - A high-performance, Pythonic language for bioinformatics

bowtie2 - A fast and sensitive gapped read aligner

bwa-mem2 - The next version of bwa-mem

bowtie - An ultrafast memory-efficient short read aligner

octopus - Bayesian haplotype-based mutation calling