megahit
Ultra-fast and memory-efficient (meta-)genome assembler (by voutcn)
octopus
Bayesian haplotype-based mutation calling (by luntergroup)
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| megahit | octopus | |
|---|---|---|
| 1 | 1 | |
| 448 | 275 | |
| - | 1.8% | |
| 0.0 | 8.0 | |
| about 1 month ago | 8 months ago | |
| C++ | C++ | |
| GNU General Public License v3.0 only | MIT License |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
megahit
Posts with mentions or reviews of megahit.
We have used some of these posts to build our list of alternatives
and similar projects.
We haven't tracked posts mentioning megahit yet.
Tracking mentions began in Dec 2020.
octopus
Posts with mentions or reviews of octopus.
We have used some of these posts to build our list of alternatives
and similar projects.
We haven't tracked posts mentioning octopus yet.
Tracking mentions began in Dec 2020.
What are some alternatives?
When comparing megahit and octopus you can also consider the following projects:
seq - A high-performance, Pythonic language for bioinformatics
bowtie2 - A fast and sensitive gapped read aligner
GenomicSQLite - Genomics Extension for SQLite
hap.py - Haplotype VCF comparison tools
bwa-mem2 - The next version of bwa-mem
bowtie - An ultrafast memory-efficient short read aligner
TileDB-VCF - Efficient variant-call data storage and retrieval library using the TileDB storage library.