megahit
Ultra-fast and memory-efficient (meta-)genome assembler (by voutcn)
hap.py
Haplotype VCF comparison tools (by Illumina)
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| megahit | hap.py | |
|---|---|---|
| 1 | 2 | |
| 448 | 341 | |
| - | 2.6% | |
| 0.0 | 0.0 | |
| about 1 month ago | over 1 year ago | |
| C++ | C++ | |
| GNU General Public License v3.0 only | GNU General Public License v3.0 or later |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
megahit
Posts with mentions or reviews of megahit.
We have used some of these posts to build our list of alternatives
and similar projects.
We haven't tracked posts mentioning megahit yet.
Tracking mentions began in Dec 2020.
hap.py
Posts with mentions or reviews of hap.py.
We have used some of these posts to build our list of alternatives
and similar projects.
We haven't tracked posts mentioning hap.py yet.
Tracking mentions began in Dec 2020.
What are some alternatives?
When comparing megahit and hap.py you can also consider the following projects:
GenomicSQLite - Genomics Extension for SQLite
seq - A high-performance, Pythonic language for bioinformatics
bowtie2 - A fast and sensitive gapped read aligner
octopus - Bayesian haplotype-based mutation calling
bowtie - An ultrafast memory-efficient short read aligner
Vcflib - C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings
bwa-mem2 - The next version of bwa-mem