hgvs VS galaxy

Compare hgvs vs galaxy and see what are their differences.

hgvs

Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs` (by biocommons)
Bioinformatics Genomics sequencing genome-analysis variant-analysis variation
Source Code
hgvs.readthedocs.io
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galaxy

Data intensive science for everyone. (by galaxyproject)
Bioinformatics Workflow Genomics Science sequencing ngs Dna usegalaxy Pipeline Workflow engine HacktoberFest
Source Code
galaxyproject.org
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hgvs galaxy
1 4
231 1,315
1.3% 1.4%
8.3 10.0
7 days ago 1 day ago
Python Python
Apache License 2.0 GNU General Public License v3.0 or later
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

hgvs

Posts with mentions or reviews of hgvs. We have used some of these posts to build our list of alternatives and similar projects.

galaxy

Posts with mentions or reviews of galaxy. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-06-17.

What are some alternatives?

When comparing hgvs and galaxy you can also consider the following projects:

mixcr - MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

nextflow - A DSL for data-driven computational pipelines

16SMaRT - 16s rRNA Sequencing Meta-analysis Reproducibility Tool (using mothur).

Biopython - Official git repository for Biopython (originally converted from CVS)

ariba - Antimicrobial Resistance Identification By Assembly

deepvariant - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

fastp - An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

sarek - Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

galaxy_ng - Ansible Galaxy Server - Issues on https://forum.ansible.com Docs on https://galaxy-ng.readthedocs.io/

ncbi-genome-download - Scripts to download genomes from the NCBI FTP servers

orfipy - Fast and flexible ORF finder

ansible-proxmox - Ansible for provisioning proxmox servers

hgvs vs mixcr galaxy vs nextflow hgvs vs 16SMaRT galaxy vs Biopython hgvs vs ariba galaxy vs deepvariant galaxy vs fastp galaxy vs sarek galaxy vs galaxy_ng galaxy vs ncbi-genome-download galaxy vs orfipy galaxy vs ansible-proxmox