galaxy
galaxy_ng
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| galaxy | galaxy_ng | |
|---|---|---|
| 4 | 6 | |
| 1,313 | 190 | |
| 2.6% | 2.6% | |
| 10.0 | 9.3 | |
| 5 days ago | 5 days ago | |
| Python | Python | |
| GNU General Public License v3.0 or later | GNU General Public License v3.0 only |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
galaxy
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Need for GUIs for bioinformatic tools?
Maybe it would help you to look at the galaxy project: GitHub main site
- BIOINFORMATICS PROJECT
- Any bioinfo open source projects looking for contributors?
- Developed a new kind of dual extruder system on fully custom built 3D printer
galaxy_ng
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Status of Galaxy development?
https://github.com/ansible/galaxy_ng is what you are looking for.
- Mirroring Ansible Galaxy content
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Ansible tooling
A quick search lead me here https://github.com/ansible/galaxy_ng/wiki/Development-Setup and here https://github.com/ansible/ansible-hub-ui. I believe that the Hub is basically galaxy-ng and probably Pulp but I'm not involved with those so it's hard to say what else may be useful.
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Ansible Community Galaxy next steps (help needed)
We're updating galaxy.ansible.com to use GalaxyNG, the code that powers Ansible Automation Hub, because it is well maintained and efficient. Help us make sure your use cases are addressed in this transition!
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Ansible Galaxy will support standalone roles indefinitely (and Galaxy NG will add 'limited' support)
https://github.com/ansible/galaxy_ng <-- this is the basis for Red Hat Ansible Automation Platform's "Automation Hub", and is a codebase that is intended to replace https://github.com/ansible/galaxy, which currently powers the 'community side' Ansible Galaxy (https://galaxy.ansible.com).
- Design a private Galaxy server
What are some alternatives?
nextflow - A DSL for data-driven computational pipelines
pulp_ansible - A Pulp plugin that manages Ansible content, i.e. roles, collections
Biopython - Official git repository for Biopython (originally converted from CVS)
awx - AWX provides a web-based user interface, REST API, and task engine built on top of Ansible. It is one of the upstream projects for Red Hat Ansible Automation Platform.
deepvariant - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
ansible-hub-ui - Ansible Automation Hub UI
fastp - An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
galaxy - Legacy Galaxy still available as read-only on https://old-galaxy.ansible.com - looking for the new galaxy -> https://github.com/ansible/galaxy_ng
sarek - Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Ansible - Ansible is a radically simple IT automation platform that makes your applications and systems easier to deploy and maintain. Automate everything from code deployment to network configuration to cloud management, in a language that approaches plain English, using SSH, with no agents to install on remote systems. https://docs.ansible.com.
ncbi-genome-download - Scripts to download genomes from the NCBI FTP servers
community-topics - Discussions for Ansible Meetings