hgvs VS ariba

Compare hgvs vs ariba and see what are their differences.

hgvs

Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs` (by biocommons)
Bioinformatics Genomics sequencing genome-analysis variant-analysis variation
Source Code
hgvs.readthedocs.io
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ariba

Antimicrobial Resistance Identification By Assembly (by sanger-pathogens)
Genomics sequencing next-generation-sequencing Research Bioinformatics bioinformatics-pipeline global-health infectious-diseases pathogen
Source Code
sanger-pathogens.github.io
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hgvs ariba
1 1
231 154
1.3% 1.9%
8.3 3.0
7 days ago 7 months ago
Python Python
Apache License 2.0 GNU General Public License v3.0 or later
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

hgvs

Posts with mentions or reviews of hgvs. We have used some of these posts to build our list of alternatives and similar projects.

ariba

Posts with mentions or reviews of ariba. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-03-25.

What are some alternatives?

When comparing hgvs and ariba you can also consider the following projects:

mixcr - MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

abricate - :mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes

16SMaRT - 16s rRNA Sequencing Meta-analysis Reproducibility Tool (using mothur).

MGEfinder - A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.

galaxy - Data intensive science for everyone.

abritamr - A pipeline for running AMRfinderPlus and collating results into functional classes

edgecase - A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, and for haplotype inference.

deepvariant - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

hgvs vs mixcr ariba vs abricate hgvs vs 16SMaRT ariba vs MGEfinder ariba vs galaxy ariba vs abritamr ariba vs 16SMaRT ariba vs edgecase ariba vs deepvariant