hgvs
ariba
hgvs | ariba | |
---|---|---|
1 | 1 | |
231 | 154 | |
1.3% | 1.9% | |
8.3 | 3.0 | |
7 days ago | 7 months ago | |
Python | Python | |
Apache License 2.0 | GNU General Public License v3.0 or later |
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hgvs
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[Question] How to transform HGVSg to HGVSp?
Python > https://github.com/biocommons/hgvs
ariba
What are some alternatives?
mixcr - MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
abricate - :mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
16SMaRT - 16s rRNA Sequencing Meta-analysis Reproducibility Tool (using mothur).
MGEfinder - A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.
galaxy - Data intensive science for everyone.
abritamr - A pipeline for running AMRfinderPlus and collating results into functional classes
edgecase - A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, and for haplotype inference.
deepvariant - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.