chipseq
patterns
| chipseq | patterns | |
|---|---|---|
| 1 | 1 | |
| 172 | 318 | |
| 3.5% | 1.3% | |
| 0.0 | 4.5 | |
| 2 months ago | 5 months ago | |
| Nextflow | Nextflow | |
| MIT License | MIT License |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
chipseq
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Nextflow issue
Launching https://github.com/nf-core/chipseq [pensive_euler] DSL2 - revision: 51eba00b32 [master]
patterns
What are some alternatives?
rnaseq - RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
sarek - Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
hlatyping - Precision HLA typing from next-generation sequencing data
eager - A fully reproducible and state-of-the-art ancient DNA analysis pipeline
rnaseq-nf - A proof of concept of RNAseq pipeline
chipseq-smk-pipeline - ChIP-Seq processing pipeline on snakemake
configs - Config files used to define parameters specific to compute environments at different Institutions
atacseq - ATAC-seq peak-calling and QC analysis pipeline
mag - Assembly and binning of metagenomes