orfs in DNA

This page summarizes the projects mentioned and recommended in the original post on /r/bioinformatics

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  • prokka

    :zap: :aquarius: Rapid prokaryotic genome annotation

  • If you need more accurate ORF(CDS) prediction including functional annotation, I recommend using CLI tools such as prokka, bakta, or DFAST (DFAST is also available in a web version).

  • bakta

    Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

  • If you need more accurate ORF(CDS) prediction including functional annotation, I recommend using CLI tools such as prokka, bakta, or DFAST (DFAST is also available in a web version).

  • WorkOS

    The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.

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  • dfast_core

    DDBJ Fast Annotation and Submission Tool

  • If you need more accurate ORF(CDS) prediction including functional annotation, I recommend using CLI tools such as prokka, bakta, or DFAST (DFAST is also available in a web version).

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a more popular project.

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