Software to make in-scale illustrations of genomic locations

1. DnaFeaturesViewer

   1 2 624 6.0 Python

   :eye: Python library to plot DNA sequence features (e.g. from Genbank files)

   

   If you can build a Python environment and do a little coding, DnaFeaturesViewer or pyGenomeViz would be good choices. You can generate the following figure from a Genbank file with about 10 lines of code. Of course, you can specify the range of coordinates to be plotted.

2. Judoscale

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3. pyGenomeViz

   2 3 319 8.1 Python

   A genome visualization python package for comparative genomics

   

   If you can build a Python environment and do a little coding, DnaFeaturesViewer or pyGenomeViz would be good choices. You can generate the following figure from a Genbank file with about 10 lines of code. Of course, you can specify the range of coordinates to be plotted.

4. gggenomes

   3 3 672 7.7 R

   A grammar of graphics for comparative genomics

   

   If you’re R proficient, gggenomes: https://github.com/thackl/gggenomes

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