pyGenomeViz: A genome visualization python package for comparative genomics

This page summarizes the projects mentioned and recommended in the original post on /r/bioinformatics
comparative-genomics genomics-visualization Bioinformatics Ggplot2 biological-data

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  • pyGenomeViz

    A genome visualization python package for comparative genomics

    • GitHub repo: https://github.com/moshi4/pyGenomeViz

  • gggenomes

    A grammar of graphics for comparative genomics

    • In R, there are a wide variety of packages that provide APIs for genome visualization, such as genoPlotR and gggenomes.

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    The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.

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  • DnaFeaturesViewer

    :eye: Python library to plot DNA sequence features (e.g. from Genbank files)

    • If you need to display annotations/genes within a single genome, DnaFeaturesViewer may be another good option.

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a more popular project.

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