Finding specific binding motifs

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  • kent

    UCSC Genome Browser source tree. Stable branch: "beta".

    • The easiest thing to do is to go the the UCSC genome browser (genome.ucsc.edu) and look at the Encode transcription factor binding data around your gene. You can also look for motifs by picking out a region of the gene and sending it to MEME, but actually looking at the experimental results is more reliable.

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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