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The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better kent alternative or higher similarity.
kent reviews and mentions
Posts with mentions or reviews of kent.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-04-06.
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reddit tools, interesting links, many other things (
22 https://genome.ucsc.edu/
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How would I respond to this evolution-denier?
His response to the points you made: "A fusion entails a mass deletion of the site within it, the fusion site doesn't encompass the entire DDX11L2 gene but covers the first intron in its sequence. http://genome.ucsc.edu/".
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Regarding 200000+ ERVs that are shared between humans and chimps
Your first and second link seem to be too complex for me, in that second link the male bonobo isn't complete and only female bobobos are available so far. What do you think of this https://genome.ucsc.edu/
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Finding specific binding motifs
The easiest thing to do is to go the the UCSC genome browser (genome.ucsc.edu) and look at the Encode transcription factor binding data around your gene. You can also look for motifs by picking out a region of the gene and sending it to MEME, but actually looking at the experimental results is more reliable.
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Any recommendations for a place to host my Dante data ?
UCSC Genome Browser
- GENETIC MAPS
- My super useful websites collection for you all!
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Technical specification for the bigWig file format
I'm looking to write some low level tools that interface with bigWig files and I'm having difficulty finding a technical summary of exactly what the contents of the file format are. I've been reading the KentTools source code in C which has modules to create and edit BWs. I've found a brief description of the sections and headers in bwgInternal.h here but the lower level modules for actually writing to disk are less well documented. I'm very happy to keep digging through the code and experimenting but was wondering if anyone knows of a better summary of what the various parts of the file expect, in English rather than in code. Thanks.
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Why does UCSC Genome browser look so archaic?
I mean if you want to work on it it is open source as apart of Kent https://github.com/ucscGenomeBrowser/kent
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A note from our sponsor - InfluxDB
www.influxdata.com | 1 May 2024
Stats
Basic kent repo stats
12
205
9.9
5 days ago
ucscGenomeBrowser/kent is an open source project licensed under GNU General Public License v3.0 or later which is an OSI approved license.
The primary programming language of kent is C.
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