single-cell-transcriptomics-app VS scvi-tools

Compare single-cell-transcriptomics-app vs scvi-tools and see what are their differences.

single-cell-transcriptomics-app

A R Shiny App for single-cell analysis (by poloarol)
rshiny rshiny-application single-cell-analysis single-cell-atac-seq single-cell-genomics single-cell-omics single-cell-rna-seq
Source Code
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scvi-tools

Deep probabilistic analysis of single-cell and spatial omics data (by scverse)
scrna-seq variational-bayes variational-autoencoder cite-seq single-cell-genomics single-cell-rna-seq deep-generative-model human-cell-atlas scverse Deep Learning
Source Code
scvi-tools.org
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single-cell-transcriptomics-app scvi-tools
1 2
0 1,128
- 2.3%
3.1 9.4
7 months ago 8 days ago
R Python
MIT License BSD 3-clause "New" or "Revised" License
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single-cell-transcriptomics-app

Posts with mentions or reviews of single-cell-transcriptomics-app. We have used some of these posts to build our list of alternatives and similar projects.

scvi-tools

Posts with mentions or reviews of scvi-tools. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-10-03.

What are some alternatives?

When comparing single-cell-transcriptomics-app and scvi-tools you can also consider the following projects:

seurat - R toolkit for single cell genomics

disentangling-vae - Experiments for understanding disentanglement in VAE latent representations

benchmark_VAE - Unifying Variational Autoencoder (VAE) implementations in Pytorch (NeurIPS 2022)

DALLE-mtf - Open-AI's DALL-E for large scale training in mesh-tensorflow.

sanbomics_scripts - scripts and notebooks from sanbomics

Roundtrip - Roundtrip: density estimation with deep generative neural networks

scvi-tools vs seurat scvi-tools vs disentangling-vae scvi-tools vs benchmark_VAE scvi-tools vs DALLE-mtf scvi-tools vs sanbomics_scripts scvi-tools vs Roundtrip