scvi-tools
Deep probabilistic analysis of single-cell and spatial omics data (by scverse)
sanbomics_scripts
scripts and notebooks from sanbomics (by mousepixels)
| scvi-tools | sanbomics_scripts | |
|---|---|---|
| 2 | 2 | |
| 1,128 | 289 | |
| 2.3% | - | |
| 9.4 | 5.6 | |
| 9 days ago | 6 days ago | |
| Python | Jupyter Notebook | |
| BSD 3-clause "New" or "Revised" License | - |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
scvi-tools
Posts with mentions or reviews of scvi-tools.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-10-03.
- Error with scvi
-
python for bioinformatics
I use both but I prefere python, its much easier for huge datasets, and a lot of useful tools are only available on python: https://github.com/YosefLab/scvi-tools
sanbomics_scripts
Posts with mentions or reviews of sanbomics_scripts.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-10-03.
What are some alternatives?
When comparing scvi-tools and sanbomics_scripts you can also consider the following projects:
seurat - R toolkit for single cell genomics
disentangling-vae - Experiments for understanding disentanglement in VAE latent representations
benchmark_VAE - Unifying Variational Autoencoder (VAE) implementations in Pytorch (NeurIPS 2022)
DALLE-mtf - Open-AI's DALL-E for large scale training in mesh-tensorflow.
Roundtrip - Roundtrip: density estimation with deep generative neural networks