Python scrna-seq

Open-source Python projects categorized as scrna-seq
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Topics: variational-autoencoder single-cell-rna-seq differential-geometry dynamical-systems Deep Learning
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Python scrna-seq Projects

  • scvi-tools

    Deep probabilistic analysis of single-cell and spatial omics data

  • dynamo-release

    Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

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NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).

Python scrna-seq related posts

  • Error with scvi

    2 projects | /r/bioinformatics | 3 Oct 2022

  • MIT Researchers Open-Source ‘Dynamo’: A Machine Learning-Based Python Framework For Gaining Insights Into Dynamic Biological Processes

    1 project | /r/Python | 8 Feb 2022

Index

Project Stars
1 scvi-tools 1,128
2 dynamo-release 402

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