scvi-tools VS Roundtrip

Compare scvi-tools vs Roundtrip and see what are their differences.

scvi-tools

Deep probabilistic analysis of single-cell and spatial omics data (by scverse)
scrna-seq variational-bayes variational-autoencoder cite-seq single-cell-genomics single-cell-rna-seq deep-generative-model human-cell-atlas scverse Deep Learning
Source Code
scvi-tools.org
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Roundtrip

Roundtrip: density estimation with deep generative neural networks (by kimmo1019)
deep-generative-model density-estimation Gan Deep Learning likelihood-free-inference
Source Code
pypi.org
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scvi-tools Roundtrip
2 1
1,128 61
2.3% -
9.4 4.9
8 days ago about 1 year ago
Python Python
BSD 3-clause "New" or "Revised" License MIT License
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scvi-tools

Posts with mentions or reviews of scvi-tools. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-10-03.

Roundtrip

Posts with mentions or reviews of Roundtrip. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-04-17.
  • Conditional Density Estimation Models?
    2 projects | /r/learnmachinelearning | 17 Apr 2023
    The two issues I am having are 1. that I don't know what is most recent or capable or advanced in this area of machine learning (HuggingFace doesn't have any), and 2. that the two models I have found - MONDE (Chilinski and Silva, 2020) and Roundtrip (Liu, et al., 2021) - are overk!ll for what I need. Are there any Bayesians out there who could point me to something practical that they have used in their jobs? And if conditional density estimators are not used in your industry, could you explain why that is the case?

What are some alternatives?

When comparing scvi-tools and Roundtrip you can also consider the following projects:

seurat - R toolkit for single cell genomics

Keras-GAN - Keras implementations of Generative Adversarial Networks.

disentangling-vae - Experiments for understanding disentanglement in VAE latent representations

pytorch-CycleGAN-and-pix2pix - Image-to-Image Translation in PyTorch

benchmark_VAE - Unifying Variational Autoencoder (VAE) implementations in Pytorch (NeurIPS 2022)

fashion-mnist - A MNIST-like fashion product database. Benchmark :point_down:

DALLE-mtf - Open-AI's DALL-E for large scale training in mesh-tensorflow.

sanbomics_scripts - scripts and notebooks from sanbomics

scvi-tools vs seurat Roundtrip vs Keras-GAN scvi-tools vs disentangling-vae Roundtrip vs pytorch-CycleGAN-and-pix2pix scvi-tools vs benchmark_VAE Roundtrip vs fashion-mnist scvi-tools vs DALLE-mtf scvi-tools vs sanbomics_scripts