gggenomes
A grammar of graphics for comparative genomics (by thackl)
gganimate
A Grammar of Animated Graphics (by thomasp85)
| gggenomes | gganimate | |
|---|---|---|
| 3 | 3 | |
| 551 | 1,925 | |
| - | - | |
| 8.6 | 7.4 | |
| about 2 months ago | 2 months ago | |
| R | R | |
| GNU General Public License v3.0 or later | GNU General Public License v3.0 or later |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
gggenomes
Posts with mentions or reviews of gggenomes.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-09-10.
-
Software to make in-scale illustrations of genomic locations
If you’re R proficient, gggenomes: https://github.com/thackl/gggenomes
-
pyGenomeViz: A genome visualization python package for comparative genomics
In R, there are a wide variety of packages that provide APIs for genome visualization, such as genoPlotR and gggenomes.
- Whole genome synteny plots
gganimate
Posts with mentions or reviews of gganimate.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-04-16.
-
[OC] Post office locations in the continental US: 1770-2002
The gganimate package is great for this! https://github.com/thomasp85/gganimate
-
The Battle for Third in Market Capitalization—Cryptocurrency [OC]
This was created using R's {gganimate} package. Huge help from this stackoverflow post showing how to interpolate the values between frames to add more flow to the animation. As well, this post about emoji's that provides a `mean_colour` function that made it easier to match bar colours to the coin images.
What are some alternatives?
When comparing gggenomes and gganimate you can also consider the following projects:
gggenes - ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2
tidytuesday - Official repo for the #tidytuesday project
pyGenomeViz - A genome visualization python package for comparative genomics
ggvenn - Venn Diagram by ggplot2, with really easy-to-use API.
orthologr - Genome wide orthology inference and dNdS estimation
patchwork - The Composer of ggplots
Synima - Synteny Imager
esquisse - RStudio add-in to make plots interactively with ggplot2
waffle - :maple_leaf: Make waffle (square pie) charts in R
redotable - A dotplot application for DNA/RNA sequence
ncaahoopR - An R package for working with NCAA Basketball Play-by-Play Data