galaxy VS galaxytools

Compare galaxy vs galaxytools and see what are their differences.

galaxy

Data intensive science for everyone. (by galaxyproject)
Bioinformatics Workflow Genomics Science sequencing ngs Dna usegalaxy Pipeline Workflow engine HacktoberFest
Source Code
galaxyproject.org
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galaxytools

Set of Galaxy tool wrappers developed at RECETOX (by RECETOX)
mass-spectrometry chromatography usegalaxy galaxyproject HacktoberFest
Source Code
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galaxy galaxytools
4 1
1,319 12
1.7% -
10.0 9.6
3 days ago 4 days ago
Python Python
GNU General Public License v3.0 or later MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

galaxy

Posts with mentions or reviews of galaxy. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-06-17.

galaxytools

Posts with mentions or reviews of galaxytools. We have used some of these posts to build our list of alternatives and similar projects.
  • Can I run my own Python code in Galaxy?
    1 project | /r/bioinformatics | 27 Jan 2021
    To make a tool out of it you'd need to 'wrap' your python script to be installable by Galaxy. Example of such wrapper can be seen here. Mind that in order to install tools to Galaxy one has to be an administrator of the instance (or know one ;).

What are some alternatives?

When comparing galaxy and galaxytools you can also consider the following projects:

nextflow - A DSL for data-driven computational pipelines

openchrom - Visualization and Analysis of mass spectrometric and chromatographic data.

Biopython - Official git repository for Biopython (originally converted from CVS)

alphapept - A modular, python-based framework for mass spectrometry. Powered by nbdev.

deepvariant - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Scrapy - Scrapy, a fast high-level web crawling & scraping framework for Python.

fastp - An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

PayloadsAllTheThings - A list of useful payloads and bypass for Web Application Security and Pentest/CTF

sarek - Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Home Assistant - :house_with_garden: Open source home automation that puts local control and privacy first.

galaxy_ng - Ansible Galaxy Server - Issues on https://forum.ansible.com Docs on https://galaxy-ng.readthedocs.io/

transformers - 🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

galaxy vs nextflow galaxytools vs openchrom galaxy vs Biopython galaxytools vs alphapept galaxy vs deepvariant galaxytools vs Scrapy galaxy vs fastp galaxytools vs PayloadsAllTheThings galaxy vs sarek galaxytools vs Home Assistant galaxy vs galaxy_ng galaxytools vs transformers