atacseq
patterns
| atacseq | patterns | |
|---|---|---|
| 2 | 1 | |
| 160 | 318 | |
| 1.9% | 1.3% | |
| 7.0 | 4.5 | |
| 20 days ago | 5 months ago | |
| Nextflow | Nextflow | |
| MIT License | MIT License |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
atacseq
patterns
What are some alternatives?
Pipeliner - An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.
sarek - Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
atac-seq-pipeline - ENCODE ATAC-seq pipeline
rnaseq - RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
methylclock - DNA methylation-based clocks
eager - A fully reproducible and state-of-the-art ancient DNA analysis pipeline
rnaseq-nf - A proof of concept of RNAseq pipeline
AltumAge
configs - Config files used to define parameters specific to compute environments at different Institutions
mag - Assembly and binning of metagenomes