adam VS seq

Compare adam vs seq and see what are their differences.

adam

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed. (by bigdatagenomics)
Spark Big Data Bioinformatics Genomics Parquet Avro Scala Java Python R
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seq

A high-performance, Pythonic language for bioinformatics (by seq-lang)
Bioinformatics computational-biology Genomics programming-language Domain-specific language Compiler Python

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adam seq
3 15
967 634
0.1% -
6.1 0.7
about 1 month ago over 1 year ago
Scala C++
Apache License 2.0 Apache License 2.0
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

adam

Posts with mentions or reviews of adam. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-04-24.

seq

Posts with mentions or reviews of seq. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2021-09-20.

What are some alternatives?

When comparing adam and seq you can also consider the following projects:

bioconda-recipes - Conda recipes for the bioconda channel.

Nim - Nim is a statically typed compiled systems programming language. It combines successful concepts from mature languages like Python, Ada and Modula. Its design focuses on efficiency, expressiveness, and elegance (in that order of priority).

nimconf2021 - Slides for Nimconf21

edlib - Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

asdf - ASDF (Advanced Scientific Data Format) is a next generation interchange format for scientific data

wyng-backup - Fast Time Machine-like backups for logical volumes & disk images

cramino - A *fast* tool for BAM/CRAM quality evaluation, intended for long reads

Biopython - Official git repository for Biopython (originally converted from CVS)

uvfs - Microscopic C++20 archive format

bowtie2 - A fast and sensitive gapped read aligner

sito - sito: A serialization suite

seq-genomics - Coursera Bioinformatics / Stepik Genome Sequencing with seq-lang

adam vs bioconda-recipes seq vs Nim adam vs nimconf2021 seq vs edlib adam vs asdf seq vs wyng-backup adam vs cramino seq vs Biopython adam vs uvfs seq vs bowtie2 adam vs sito seq vs seq-genomics