dance VS mokapot

Compare dance vs mokapot and see what are their differences.

dance

DANCE: a deep learning library and benchmark platform for single-cell analysis (by OmicsML)
Bioinformatics dance Data Science Deep Learning graph-neural-networks Machine Learning multimodality Python single-cell spatial-transcriptomics Benchmark computational-biology single-cell-rna-seq single-cell-rna-sequencing
Source Code
pydance.readthedocs.io
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mokapot

Fast and flexible semi-supervised learning for peptide detection in Python (by wfondrie)
proteomics Machine Learning Bioinformatics Python Conda peptide-detection percolator
Source Code
mokapot.readthedocs.io
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dance mokapot
1 1
324 37
4.3% -
8.7 3.4
8 days ago 3 months ago
Python Python
BSD 2-clause "Simplified" License Apache License 2.0
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

dance

Posts with mentions or reviews of dance. We have used some of these posts to build our list of alternatives and similar projects.

mokapot

Posts with mentions or reviews of mokapot. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-06-06.

What are some alternatives?

When comparing dance and mokapot you can also consider the following projects:

Clairvoyante - Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing

sage - Proteomics search & quantification so fast that it feels like magic

mlgauge - A simple library to benchmark the performance of machine learning methods across different datasets.

alphapept - A modular, python-based framework for mass spectrometry. Powered by nbdev.

haiku-geometric - A collection of graph neural networks implementations in JAX

alfie - A neural network for alignment-free, kingdom-level classification of eDNA

dephell - :package: :fire: Python project management. Manage packages: convert between formats, lock, install, resolve, isolate, test, build graph, show outdated, audit. Manage venvs, build package, bump version.

dance vs Clairvoyante mokapot vs sage dance vs mlgauge mokapot vs alphapept dance vs haiku-geometric mokapot vs alfie dance vs alfie mokapot vs dephell