mokapot VS alphapept

Compare mokapot vs alphapept and see what are their differences.

mokapot

Fast and flexible semi-supervised learning for peptide detection in Python (by wfondrie)
proteomics Machine Learning Bioinformatics Python Conda peptide-detection percolator
Source Code
mokapot.readthedocs.io
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alphapept

A modular, python-based framework for mass spectrometry. Powered by nbdev. (by MannLabs)
mass-spectrometry Bioinformatics proteomics
Source Code
mannlabs.github.io
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mokapot alphapept
1 2
37 158
- 3.8%
3.4 6.4
3 months ago 28 days ago
Python HTML
Apache License 2.0 Apache License 2.0
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

mokapot

Posts with mentions or reviews of mokapot. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-06-06.

alphapept

Posts with mentions or reviews of alphapept. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-10-30.

What are some alternatives?

When comparing mokapot and alphapept you can also consider the following projects:

sage - Proteomics search & quantification so fast that it feels like magic

openchrom - Visualization and Analysis of mass spectrometric and chromatographic data.

alfie - A neural network for alignment-free, kingdom-level classification of eDNA

docker-builds - :package: :whale: Dockerfiles and documentation on tools for public health bioinformatics

dephell - :package: :fire: Python project management. Manage packages: convert between formats, lock, install, resolve, isolate, test, build graph, show outdated, audit. Manage venvs, build package, bump version.

dance - DANCE: a deep learning library and benchmark platform for single-cell analysis

galaxytools - Set of Galaxy tool wrappers developed at RECETOX

training-material - A collection of Galaxy-related training material

pypop - PyPop: Python for Population Genomics

mokapot vs sage alphapept vs openchrom mokapot vs alfie alphapept vs docker-builds mokapot vs dephell alphapept vs sage mokapot vs dance alphapept vs galaxytools alphapept vs training-material alphapept vs pypop