Does anyone know a great guide/documentation explaining how to implement Percolator?

This page summarizes the projects mentioned and recommended in the original post on /r/proteomics
Bioinformatics proteomics Machine Learning Python Conda

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  • mokapot

    Fast and flexible semi-supervised learning for peptide detection in Python

    • Why not use MokaPot instead? It’s fundamentally a python installation of percolator. https://github.com/wfondrie/mokapot

  • sage

    Proteomics search & quantification so fast that it feels like magic (by lazear)

    • If you want to implement LDA from scratch, you could check out how Sage is doing it.

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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