FastANI VS bakta

Compare FastANI vs bakta and see what are their differences.

FastANI

Fast Whole-Genome Similarity (ANI) Estimation (by ParBLiSS)
microbial-genomics
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bakta

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids (by oschwengers)
Bioinformatics microbial-genomics genome-annotation bacteria bacterial-genomes plasmids metagenome-assembled-genomes Annotation mag
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FastANI bakta
1 1
348 398
1.4% -
3.7 8.5
4 months ago 2 months ago
C++ Python
Apache License 2.0 GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
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FastANI

Posts with mentions or reviews of FastANI. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2021-03-29.

bakta

Posts with mentions or reviews of bakta. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-10-11.
  • orfs in DNA
    3 projects | /r/bioinformatics | 11 Oct 2022
    If you need more accurate ORF(CDS) prediction including functional annotation, I recommend using CLI tools such as prokka, bakta, or DFAST (DFAST is also available in a web version).

What are some alternatives?

When comparing FastANI and bakta you can also consider the following projects:

pyGenomeViz - A genome visualization python package for comparative genomics

prokka - :zap: :aquarius: Rapid prokaryotic genome annotation

awesome-genome-visualization - A list of interesting genome browser or genome-browser-like implementations

GTDBTk - GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

pyCirclize - Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

metaGEM - :gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data

dfast_core - DDBJ Fast Annotation and Submission Tool

QUEEN - QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources

FastANI vs pyGenomeViz bakta vs prokka FastANI vs awesome-genome-visualization bakta vs GTDBTk FastANI vs pyCirclize bakta vs metaGEM bakta vs dfast_core bakta vs QUEEN