FastANI
Fast Whole-Genome Similarity (ANI) Estimation (by ParBLiSS)
awesome-genome-visualization
A list of interesting genome browser or genome-browser-like implementations (by cmdcolin)
| FastANI | awesome-genome-visualization | |
|---|---|---|
| 1 | 1 | |
| 348 | 733 | |
| 1.4% | - | |
| 3.7 | 8.0 | |
| 4 months ago | 15 days ago | |
| C++ | TypeScript | |
| Apache License 2.0 | - |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
FastANI
Posts with mentions or reviews of FastANI.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-03-29.
-
awesome-genome-visualization - my futile attempt to catalog all sorts of genome visualization tools (currently at 286 tools with screenshots now!)
FastANI (https://github.com/ParBLiSS/FastANI)
awesome-genome-visualization
Posts with mentions or reviews of awesome-genome-visualization.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-03-29.
-
awesome-genome-visualization - my futile attempt to catalog all sorts of genome visualization tools (currently at 286 tools with screenshots now!)
The code at https://github.com/cmdcolin/awesome-genome-visualization is actually more hierarchical but the website is slowly drifting away from that
What are some alternatives?
When comparing FastANI and awesome-genome-visualization you can also consider the following projects:
pyGenomeViz - A genome visualization python package for comparative genomics
bakta - Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
pyCirclize - Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)