phylophlan VS kneaddata

Compare phylophlan vs kneaddata and see what are their differences.

phylophlan

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes (by biobakery)
Python Tools biobakery phylogenetic-trees
Source Code
huttenhower.sph.harvard.edu
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kneaddata

Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments. (by biobakery)
Public biobakery Tools quality-control kneaddata bowtie2
Source Code
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phylophlan kneaddata
1 1
114 101
2.6% -
6.7 3.1
about 1 month ago about 2 months ago
Python Python
MIT License GNU General Public License v3.0 or later
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
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phylophlan

Posts with mentions or reviews of phylophlan. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-02-16.
  • PhyloPhlAN Tutorial?
    2 projects | /r/bioinformatics | 16 Feb 2023
    I am trying to use PhyloPhlAn (https://github.com/biobakery/phylophlan). I have read the wiki in GitHub it is very confusing. I tried several runs but it came out as an error.

kneaddata

Posts with mentions or reviews of kneaddata. We have used some of these posts to build our list of alternatives and similar projects.

What are some alternatives?

When comparing phylophlan and kneaddata you can also consider the following projects:

empress - A fast and scalable phylogenetic tree viewer for microbiome data analysis

graphlan - High-quality circular representations of taxonomic and phylogenetic trees

PySnapStories - A Python script to download public Snapchat user stories from verified accounts, subjects and Map events.

pyCircos - python Circos

public-apis - A collective list of free APIs

sherlock - 🔎 Hunt down social media accounts by username across social networks

Ficus - Scala-friendly companion to Typesafe config

python-mini-projects - A collection of simple python mini projects to enhance your python skills

tech-debt - Technical debt happens when low code quality slows new developments : you have to pay time interests. TechDebt allows you to quantify and track your technical debt.

Awesome-Linux-Software - 🐧 A list of awesome Linux softwares

phylophlan vs empress kneaddata vs graphlan phylophlan vs graphlan kneaddata vs PySnapStories phylophlan vs pyCircos kneaddata vs public-apis phylophlan vs sherlock kneaddata vs Ficus phylophlan vs python-mini-projects kneaddata vs tech-debt kneaddata vs Awesome-Linux-Software