phylophlan VS empress

Compare phylophlan vs empress and see what are their differences.

phylophlan

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes (by biobakery)
Python Tools biobakery phylogenetic-trees
Source Code
huttenhower.sph.harvard.edu
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empress

A fast and scalable phylogenetic tree viewer for microbiome data analysis (by biocore)
phylogeny Visualization microbiome tree-plot Bioinformatics ordination biplot qiime2 qiime
Source Code
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phylophlan empress
1 1
114 44
2.6% -
6.7 10.0
about 1 month ago almost 2 years ago
Python JavaScript
MIT License BSD 3-clause "New" or "Revised" License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

phylophlan

Posts with mentions or reviews of phylophlan. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-02-16.
  • PhyloPhlAN Tutorial?
    2 projects | /r/bioinformatics | 16 Feb 2023
    I am trying to use PhyloPhlAn (https://github.com/biobakery/phylophlan). I have read the wiki in GitHub it is very confusing. I tried several runs but it came out as an error.

empress

Posts with mentions or reviews of empress. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-02-16.

What are some alternatives?

When comparing phylophlan and empress you can also consider the following projects:

graphlan - High-quality circular representations of taxonomic and phylogenetic trees

codex - A minimal genetic data explorer that processes all genetic information locally.

pyCircos - python Circos

MicrobiomeStat - Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat

sherlock - 🔎 Hunt down social media accounts by username across social networks

malware-phylogeny - malware phylogeny for WSO web shell, Shellbot IRC bot and algorithm

python-mini-projects - A collection of simple python mini projects to enhance your python skills

phylophlan vs graphlan empress vs codex phylophlan vs pyCircos empress vs MicrobiomeStat phylophlan vs sherlock empress vs malware-phylogeny phylophlan vs python-mini-projects