atlas
ATLAS - Three commands to start analyzing your metagenome data (by metagenome-atlas)
biopython-coronavirus
Biopython Jupyter Notebook tutorial to characterize a small genome (by chris-rands)
atlas | biopython-coronavirus | |
---|---|---|
2 | 1 | |
346 | 87 | |
1.2% | - | |
9.3 | 0.0 | |
3 months ago | about 4 years ago | |
Python | Jupyter Notebook | |
BSD 3-clause "New" or "Revised" License | MIT License |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
atlas
Posts with mentions or reviews of atlas.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-08-23.
- Resources to learn genetic data manipulation basics?
-
Is it possible to calculate relative abundance of microorganisms in a community through shotgun-metagenomics?
You might want to check Atlas, an assembly/binning based pipeline for metagenomics data Publication Github
biopython-coronavirus
Posts with mentions or reviews of biopython-coronavirus.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-08-23.
What are some alternatives?
When comparing atlas and biopython-coronavirus you can also consider the following projects:
kraken-biom - Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).
pypsa-eur - PyPSA-Eur: A Sector-Coupled Open Optimisation Model of the European Energy System
GraphBin2 - ☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
zarp - The Zavolab Automated RNA-seq Pipeline
chipseq-smk-pipeline - ChIP-Seq processing pipeline on snakemake
eggnog-mapper - Fast genome-wide functional annotation through orthology assignment
bioinformatics - :microscope: Path to a free self-taught education in Bioinformatics!