kneaddata vs graphlan

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kneaddata		graphlan
	Project
1	Mentions	1
99	Stars	79
-	Growth	-
3.1	Activity	0.0
about 1 month ago	Latest Commit	about 2 years ago
Python	Language	Python
GNU General Public License v3.0 or later	License	MIT License

The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

kneaddata

Posts with mentions or reviews of kneaddata. We have used some of these posts to build our list of alternatives and similar projects.

How to match up names of read pairs in constant memory?
1 project | /r/bioinformatics | 18 Feb 2021

I have, uh, a few of those files. But I've done https://github.com/biobakery/kneaddata/pull/16 and I think I'm good now!

graphlan

Posts with mentions or reviews of graphlan. We have used some of these posts to build our list of alternatives and similar projects.

How would one code a graphic, chronogramatic display, of a timeline in concentric circles, instead of linear parallels? Alternately, a spiral, with "phase" giving "day and month"?
1 project | /r/learnpython | 31 Jul 2021

In fact, the more I think about it, the more I can see diagrams that it would make some amount of sense to wrap around in circles, flowing from a "core" to an "outside". Exergy diagrams, for example (Sankey, but wrapped around). Certain hierarchies/dendograms, we do talk a lot about "the inner circle" and the "center of power" as much as "the top rung" (this is commonly done with taxonomies, I understand). Growth phases, accident fallouts... but those are basically timelines too.

What are some alternatives?

When comparing kneaddata and graphlan you can also consider the following projects:

PySnapStories - A Python script to download public Snapchat user stories from verified accounts, subjects and Map events.

python-mini-projects - A collection of simple python mini projects to enhance your python skills

public-apis - A collective list of free APIs

taxopedia - Taxonomic trees (cladograms) from Wikipedia-scraped data.

Ficus - Scala-friendly companion to Typesafe config

pyCircos - python Circos

tech-debt - Technical debt happens when low code quality slows new developments : you have to pay time interests. TechDebt allows you to quantify and track your technical debt.

biobakery_workflows - bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validated tools and parameters.

Awesome-Linux-Software - 🐧 A list of awesome Linux softwares

phylophlan - Precise phylogenetic analysis of microbial isolates and genomes from metagenomes