evodiff
pypdb
evodiff | pypdb | |
---|---|---|
1 | 1 | |
425 | 296 | |
5.9% | - | |
8.9 | 5.4 | |
about 1 month ago | about 2 months ago | |
Python | Python | |
MIT License | MIT License |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
evodiff
-
What’s Next in Protein Design? Microsoft Researchers Introduce EvoDiff: A Groundbreaking AI Framework for Sequence-First Protein Engineering
Github: https://github.com/microsoft/evodiff
pypdb
-
How to mass-download the PDB files from UniProt for a protein using python?
Biopython, PDB API, Someone's else's implemention.
What are some alternatives?
tape - Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.
deepblast - Neural Networks for Protein Sequence Alignment
protein-bert-pytorch - Implementation of ProteinBERT in Pytorch
BioJava - :book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.
stylegan2-pytorch - Simplest working implementation of Stylegan2, state of the art generative adversarial network, in Pytorch. Enabling everyone to experience disentanglement
EquiBind - EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
jukebox - Code for the paper "Jukebox: A Generative Model for Music"
hPDB - PDB parser in Haskell
denoising-diffusion-pytorch - Implementation of Denoising Diffusion Probabilistic Model in Pytorch